STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_031116Uncharacterized protein. (400 aa)    
Predicted Functional Partners:
APZ42_016706
Putative Histone-lysine N-methyltransferase.
    
 0.702
APZ42_022107
Putative SH3 domain-containing RING finger protein 3.
    
 0.700
APZ42_017853
Putative Histone-lysine N-methyltransferase SETD1.
    
 0.666
APZ42_016873
Histone-lysine N-methyltransferase E(Z).
    
 0.656
APZ42_019616
Histone-lysine N-methyltransferase PR-Set7.
    
 0.653
APZ42_029234
Nicotinic acetylcholine receptor beta 3 (Dbeta3) subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
     
 0.640
APZ42_019907
PHD finger protein 20 protein.
     
 0.639
APZ42_022742
Putative Histone-lysine N-methyltransferase NSD3.
    
 0.617
APZ42_025040
PWWP domain-containing protein.
    
 0.617
APZ42_019725
Putative Sorbin and SH3 domain-containing protein.
    
 0.603
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.