STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_030707Putative FK506-binding protein 15. (758 aa)    
Predicted Functional Partners:
APZ42_018667
Syntaxin-5; Belongs to the syntaxin family.
   
 0.977
APZ42_015885
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.964
APZ42_027629
Golgi reassembly-stacking protein 2.
    
 0.909
APZ42_028742
General vesicular transport factor p115.
   
 0.875
APZ42_027381
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.713
APZ42_030563
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
     
 0.711
APZ42_032780
Sec1 family domain-containing protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.711
APZ42_028881
Dynactin subunit 2.
     
 0.703
EOG090X0GIP
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
     
 0.698
APZ42_021680
Transmembrane emp24 domain-containing protein eca; Belongs to the EMP24/GP25L family.
    
  0.697
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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