STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_030443Putative Nibrin. (610 aa)    
Predicted Functional Partners:
APZ42_034386
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.999
APZ42_022277
Non-specific serine/threonine protein kinase.
    
 0.995
APZ42_034515
DNA repair protein RAD50; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.984
APZ42_021373
DNA repair protein RAD50.
   
 0.984
APZ42_026295
BRCA1-associated RING domain protein 1.
    
 0.981
APZ42_026490
ATM/Rad3 and Mei-41-like protein; Belongs to the PI3/PI4-kinase family.
    
 0.975
APZ42_031507
Breast and ovarian cancer sususceptibility protein.
    
 0.970
APZ42_014340
Myotrophin.
    
 0.970
APZ42_017653
Putative PAX-interacting protein 1.
    
 0.954
APZ42_018837
Mutator-like protein.
    
 0.954
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.