STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_029831Long-chain-fatty-acid--CoA ligase 3. (690 aa)    
Predicted Functional Partners:
APZ42_032061
Peroxisomal carnitine O-octanoyltransferase; Belongs to the carnitine/choline acetyltransferase family.
     
 0.796
APZ42_015782
Long-chain-fatty-acid--CoA ligase bubblegum-like protein.
  
 
0.793
APZ42_015143
Palmitoyl-protein thioesterase.
     
 0.787
APZ42_020283
Lysosomal thioesterase PPT2.
     
 0.787
APZ42_033871
Leucine-rich repeat kinase.
    
 0.781
APZ42_011718
Cellular tumor antigen p53.
    
 0.765
APZ42_029151
Putative Triacylglycerol lipase.
    
  0.745
APZ42_023861
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.716
APZ42_014229
Long-chain-fatty-acid--CoA ligase.
  
 
0.709
APZ42_018618
Hydroxysteroid dehydrogenase 2-like protein; Belongs to the G-protein coupled receptor 1 family.
  
 0.699
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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