STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_029560Rac GTP-binding protein ARAC9. (191 aa)    
Predicted Functional Partners:
APZ42_017917
Epidermal growth factor receptor substrate 15 1-like protein.
    
 0.999
APZ42_026444
MAM domain-containing glycosylphosphatidylinositol anchor protein 1.
   
 0.993
APZ42_022107
Putative SH3 domain-containing RING finger protein 3.
    
 0.983
APZ42_014343
Putative Triple functional domain protein.
    
 0.955
APZ42_021212
Triple functional domain protein.
    
 0.955
APZ42_031573
Putative E3 ubiquitin-protein ligase RNF182.
    
 0.920
APZ42_033871
Leucine-rich repeat kinase.
  
 0.904
EOG090X0EJY
Rho GDP-dissociation inhibitor 2.
   
 0.899
APZ42_024498
Spermatogenesis-associated 13-like protein.
    
 0.889
APZ42_027332
Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.888
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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