STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_029061Class E basic helix-loop-helix 40-like protein. (367 aa)    
Predicted Functional Partners:
EOG090X0CZV
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.843
APZ42_013687
E3 ubiquitin-protein ligase FANCL.
    
  0.831
APZ42_001563
Putative E3 ubiquitin-protein ligase FANCL.
    
  0.831
APZ42_023093
Putative Fanconi anemia group A protein.
    
  0.782
APZ42_021874
Nuclear transport factor 2.
    
  0.782
APZ42_014784
Neurogenic differentiation factor 4-like protein.
  
 
 0.712
APZ42_030968
Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.651
APZ42_014312
Basic helix-loop-helix neural transcription factor TAP.
    
 0.651
APZ42_020642
Groucho-like protein.
    
 
 0.601
APZ42_030306
Groucho-like protein.
    
 
 0.601
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.