STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_029020Endothelial transcription factor GATA-2. (167 aa)    
Predicted Functional Partners:
APZ42_011002
Putative T-box transcription factor TBX5-A.
   
 0.807
APZ42_025330
Putative Fork head transcription factor.
    
 0.787
APZ42_016764
Uncharacterized protein.
    
 0.749
APZ42_016781
Putative Helix-loop-helix protein 1.
    
 0.749
APZ42_022990
Chromatin accessibility complex 14kD protein.
    
 
 0.741
APZ42_019644
Glutaredoxin-3.
    
 
 0.737
APZ42_013215
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.729
APZ42_026392
TATA-box-binding protein.
   
 0.724
APZ42_028336
Core-binding factor subunit beta.
     
 0.711
APZ42_020740
Histone acetyltransferase KAT2A.
    
 0.709
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.