STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_028695Protein-L-isoaspartate O-methyltransferase. (254 aa)    
Predicted Functional Partners:
APZ42_011041
Nedd8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.
 
 
   0.683
APZ42_018255
Tetratricopeptide repeat protein 7A.
      
 0.570
APZ42_029214
Loss of heterozygosity 12 chromosomal region 1 protein.
      
 0.559
APZ42_015375
BAX inhibitor 1; Belongs to the BI1 family.
      
 0.558
APZ42_018388
Alpha-enolase.
   
 
 0.536
APZ42_011347
Methyltransferase protein 6.
      
 0.529
APZ42_020437
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
  
 0.517
APZ42_010917
Bifunctional glutamate/proline--tRNA ligase.
     
 0.506
APZ42_012381
E3 ubiquitin-protein ligase UHRF1.
      
 0.501
APZ42_023537
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.501
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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