STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_026932YDG domain-containing protein. (517 aa)    
Predicted Functional Partners:
APZ42_022979
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 0.902
APZ42_023821
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.745
APZ42_028882
DNA ligase.
   
 
 0.710
APZ42_018111
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.682
APZ42_019405
Histone-lysine N-methyltransferase EHMT1.
    
 0.616
APZ42_012018
Putative Adhesion G protein-coupled receptor B3; Belongs to the G-protein coupled receptor 2 family.
    
  0.601
APZ42_027297
Adhesion G protein-coupled receptor L4; Belongs to the G-protein coupled receptor 2 family.
    
  0.601
APZ42_027294
Putative Adhesion G protein-coupled receptor E2; Belongs to the G-protein coupled receptor 2 family.
    
  0.601
APZ42_030746
Latrophilin Cirl; Belongs to the G-protein coupled receptor 2 family.
    
  0.594
APZ42_033871
Leucine-rich repeat kinase.
    
 0.592
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.