STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_026942Putative Lipase 3. (442 aa)    
Predicted Functional Partners:
APZ42_016748
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.749
APZ42_018618
Hydroxysteroid dehydrogenase 2-like protein; Belongs to the G-protein coupled receptor 1 family.
  
 0.668
APZ42_030783
Hydroxysteroid dehydrogenase protein 2.
  
 0.668
APZ42_033831
Patatin phospholipase domain-containing protein 2.
    
 0.618
APZ42_025545
Haloacid dehalogenase-like hydrolase domain-containing protein 3.
  
 
 0.574
APZ42_019777
Isochorismatase domain-containing protein 2, mitochondrial.
  
 0.573
APZ42_015998
Uncharacterized protein.
  
 0.573
APZ42_033871
Leucine-rich repeat kinase.
   
  0.566
APZ42_014885
4-hydroxybutyrate Coenzyme A transferase.
    
 0.556
APZ42_029080
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
    
 0.554
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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