STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_026729Ankyrin repeat and fibronectin type-III domain-containing protein 1. (1459 aa)    
Predicted Functional Partners:
APZ42_033023
Putative TGF-beta ligand glass bottom boat protein.
    
 0.703
APZ42_032315
Putative TGF-beta ligand Decapentaplegic protein.
    
 0.703
APZ42_019659
Inhibin beta B chain-like protein.
    
 0.637
APZ42_030681
Bone morphogenetic protein.
    
 0.637
APZ42_021933
Growth/differentiation factor 3-like protein.
    
 0.637
APZ42_034408
Bone morphogenetic protein 8A.
    
 0.637
APZ42_018173
Transforming growth factor beta-3.
    
 0.637
APZ42_026733
Synaptogyrin-3.
      
 0.509
APZ42_016585
F-box/LRR-repeat protein 4.
    
 
 0.458
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.