STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_026605Coiled-coil domain-containing protein. (424 aa)    
Predicted Functional Partners:
APZ42_016872
Putative 5'-AMP-activated protein kinase subunit gamma-2.
   
 0.900
APZ42_010947
5'-AMP-activated protein kinase subunit beta-1.
    
 0.896
APZ42_031573
Putative E3 ubiquitin-protein ligase RNF182.
   
 0.790
APZ42_025261
Uncharacterized protein.
   
  
 0.781
APZ42_034143
Coiled-coil domain-containing protein 65.
   
 
 0.752
APZ42_021279
Calcium-binding protein.
    
 0.749
APZ42_021144
Calcium/calmodulin-dependent protein kinase kinase; Belongs to the protein kinase superfamily.
    
 0.741
APZ42_020503
Calcium/calmodulin-dependent protein kinase kinase.
    
 0.741
APZ42_012654
Alphabet.
   
 0.740
APZ42_033269
Putative Serine/threonine-protein kinase STE20.
    
 0.737
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.