STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_026497Microspherule protein 1. (469 aa)    
Predicted Functional Partners:
APZ42_019907
PHD finger protein 20 protein.
    
 0.998
APZ42_022907
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 0.944
APZ42_019520
Putative KAT8 regulatory NSL complex subunit 3.
   
 0.941
APZ42_017807
Putative KAT8 regulatory NSL complex subunit 1.
    
 0.938
APZ42_030808
Uncharacterized protein.
    
  0.934
APZ42_018925
PHD finger protein 23B.
    
 0.925
APZ42_014296
Actin-related protein 5; Belongs to the actin family.
    
 0.924
APZ42_017799
Uncharacterized protein.
   
 0.918
APZ42_011199
Uncharacterized protein.
    
  0.897
APZ42_011793
Uncharacterized protein.
    
 0.883
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.