STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_02609860S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (510 aa)    
Predicted Functional Partners:
EOG090X02QX
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
  
 
 0.998
APZ42_031690
Proliferation-associated protein 2G4.
   
 
 0.998
APZ42_022572
Putative Ribosome biogenesis protein RLP24.
   
 
 0.996
APZ42_016663
Large subunit GTPase 1.
   
 
 0.995
EOG090X06E3
Putative Zinc finger protein.
   
 
 0.992
EOG090X0BJA
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.987
APZ42_033471
Guanine nucleotide-binding protein 3.
   
 
 0.987
APZ42_033798
Uncharacterized protein.
   
 
 0.985
APZ42_011455
60S ribosomal protein L10.
    
 
 0.982
EOG090X09YS
60S ribosomal protein L5.
   
 
 0.981
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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