STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_025821Bromo domain-containing protein. (683 aa)    
Predicted Functional Partners:
APZ42_032694
Uncharacterized protein.
   
  0.800
EOG090X0C57
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.764
EOG090X0HZC
Transcription initiation factor TFIID subunit 12.
    
 0.750
APZ42_014504
Transcription initiation factor TFIID subunit 9.
    
 0.750
APZ42_016542
Transcription initiation factor TFIID subunit 1.
   
 0.749
APZ42_012972
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 0.747
APZ42_016450
Putative Transcription initiation factor TFIID subunit 4.
    
 0.745
APZ42_011351
Cell division cycle protein 16.
    
 0.741
APZ42_022511
Intraflagellar transport protein 140.
    
 0.738
APZ42_024009
Putative Transcription initiation factor TFIID subunit 2.
   
 0.737
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.