STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_024858Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (317 aa)    
Predicted Functional Partners:
APZ42_015979
Ribose-phosphate pyrophosphokinase 1.
   
 0.917
APZ42_013623
Deoxyribose-phosphate aldolase.
    
 0.908
APZ42_022726
Transketolase protein 2.
  
 0.907
APZ42_018092
Phosphoglucomutase; Belongs to the phosphohexose mutase family.
    
 0.901
APZ42_014911
Glucose 1,6-bisphosphate synthase; Belongs to the phosphohexose mutase family.
  
 
 0.896
APZ42_034435
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 0.832
APZ42_013214
IU_nuc_hydro domain-containing protein.
 
 
 0.824
APZ42_011252
Uridine phosphorylase 1.
   
 0.823
APZ42_018792
Adenine phosphoribosyltransferase.
  
 0.814
APZ42_016392
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.810
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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