STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_024683Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (532 aa)    
Predicted Functional Partners:
APZ42_026121
Ionotropic receptor 76a.
  
  
 
0.534
APZ42_030566
NMDA receptor 2; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 
0.528
APZ42_030388
Uncharacterized protein.
    
 
0.528
APZ42_023214
Uncharacterized protein.
    
  0.528
APZ42_013148
Lig_chan-Glu_bd domain-containing protein.
  
  
 
0.507
APZ42_012137
Glutamate receptor ionotropic, NMDA.
    
 
0.474
APZ42_032159
PBPe domain-containing protein.
    
 
0.474
APZ42_016706
Putative Histone-lysine N-methyltransferase.
     
 0.461
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.