STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_024646Putative Myosin-XV. (114 aa)    
Predicted Functional Partners:
APZ42_012813
Putative Usher Syndrome type-1G protein.
   
 0.783
APZ42_018254
Calmodulin; Belongs to the calmodulin family.
    
 0.782
APZ42_024582
Calmodulin-like protein; Belongs to the calmodulin family.
    
 0.782
APZ42_011834
Harmonin usher syndrome protein pdz domain-containing protein.
    
 0.705
APZ42_022783
Nonmuscle myosin essential light chain.
    
 0.660
EOG090X0GKM
Myosin regulatory light chain 2, atrial.
    
 0.630
APZ42_029333
Troponin C 25D.
    
 0.630
APZ42_014959
Putative EF-hand calcium-binding domain-containing protein 2.
    
 0.630
APZ42_030436
Troponin C.
    
 0.630
APZ42_030247
Troponin C.
    
 0.630
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.