STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_023947F-box only protein 25. (509 aa)    
Predicted Functional Partners:
APZ42_031391
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.921
APZ42_017914
Cullin-5; Belongs to the cullin family.
    
 0.898
APZ42_016484
Cullin-3; Belongs to the cullin family.
    
 0.815
APZ42_032633
RING-box protein 1A.
   
 0.740
APZ42_026488
Cullin-associated NEDD8-dissociated protein 1.
    
  0.721
APZ42_026495
NEDD8-activating enzyme E1 regulatory subunit.
    
  0.710
APZ42_027881
Ubiquitin-like domain-containing protein.
   
  0.692
APZ42_031744
RING-box protein 2.
   
 0.690
APZ42_026496
Nedd8-activating enzyme E1 catalytic subunit.
    
  0.685
APZ42_016769
S-phase kinase-associated protein.
     
 0.682
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.