STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_024053WD repeat-containing protein 35. (3780 aa)    
Predicted Functional Partners:
APZ42_017388
Intraflagellar transport protein 122.
  
 0.998
APZ42_022511
Intraflagellar transport protein 140.
  
 
 0.997
APZ42_029595
Outer segment 6.
  
 0.996
APZ42_013633
Uncharacterized protein.
    
 0.993
APZ42_033260
Tetratricopeptide repeat protein 21A.
  
 0.992
APZ42_034402
Intraflagellar transport protein 80.
  
 0.946
APZ42_019267
Clusterin-associated protein 1.
  
  
 0.894
APZ42_017886
Putative Tetratricopeptide repeat protein.
  
 
 0.887
APZ42_030684
Intraflagellar transport protein 46.
  
  
 0.884
APZ42_022282
Tetratricopeptide repeat protein 30A.
  
 
 0.878
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.