STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_022539Putative Transporter. (258 aa)    
Predicted Functional Partners:
APZ42_019647
Syntaxin-1A; Belongs to the syntaxin family.
    
 0.586
APZ42_020758
Syntaxin-1A.
    
 0.586
APZ42_013321
Putative Syntaxin; Belongs to the syntaxin family.
    
 0.586
APZ42_027855
Amino acid transporter.
    
 0.567
APZ42_018039
MARVEL domain-containing protein.
    
 0.554
APZ42_026778
Putative Calcium/calmodulin-dependent protein kinase type II subunit alpha.
    
  0.543
APZ42_026822
Putative Peripheral plasma membrane protein CASK.
    
  0.543
APZ42_026816
Peripheral plasma membrane protein CASK.
    
  0.543
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.