STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_022850Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (576 aa)    
Predicted Functional Partners:
APZ42_032775
Methylosome protein 50.
   
 0.999
APZ42_016952
Methylosome subunit pICln.
   
 0.994
APZ42_033658
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
    
 
 0.978
APZ42_026286
Fizzy-related protein.
   
 0.967
APZ42_024378
Uncharacterized protein.
   
 0.967
APZ42_029156
Putative Myt1.
    
 0.949
APZ42_014603
Wee1-like protein kinase.
    
 0.949
APZ42_011837
Serine/threonine-protein kinase BRSK1.
    
 0.935
APZ42_021470
Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
    
 
 0.896
APZ42_004607
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.877
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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