STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_020510Uncharacterized protein. (519 aa)    
Predicted Functional Partners:
APZ42_032688
Teneurin-3.
   
 
 0.547
APZ42_018963
Expanded,-like protein.
  
 
   0.522
APZ42_026158
TNFR-Cys domain-containing protein.
   
 
 0.502
APZ42_014297
Putative Netrin receptor UNC5C.
   
 
 0.502
APZ42_006551
Netrin receptor unc5c.
   
 
 0.502
APZ42_004172
Netrin receptor UNC5C.
   
 
 0.502
APZ42_016914
SUZ domain-containing protein 1.
    
 
 0.489
APZ42_019570
Teneurin-1.
    
 
 0.489
APZ42_017290
PDGF-and VEGF-related factor-like protein.
    
 
 0.489
APZ42_032465
PDGF-and VEGF-related factor-like protein; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.489
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.