STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_020577RAWUL domain-containing protein. (683 aa)    
Predicted Functional Partners:
APZ42_019830
E3 ubiquitin-protein ligase RING2-A.
    
 0.970
APZ42_022578
Chromobox-like protein.
    
 0.958
APZ42_012428
Polycomb protein SCMH1.
    
 0.900
APZ42_012143
JmjC domain-containing Histone demethylation protein 1.
   
 0.895
APZ42_023459
YY1-associated factor 2.
    
 0.874
APZ42_021395
Uncharacterized protein.
    
 0.825
APZ42_032888
Pentraxin-4-like protein.
    
 0.818
APZ42_016873
Histone-lysine N-methyltransferase E(Z).
    
 0.789
APZ42_011552
Polycomb protein suz12.
    
 0.747
APZ42_027874
Polycomb protein EED.
    
 0.740
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.