STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_020661Cytochrome C oxidase assembly protein COX11. (210 aa)    
Predicted Functional Partners:
APZ42_011471
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
  
 0.996
APZ42_025225
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
  
 
 0.987
APZ42_002193
Cytochrome C oxidase assembly protein COX15.
  
 0.983
APZ42_003292
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 
 0.942
APZ42_025226
Mt:coi.
  
 
 0.942
APZ42_015811
Cytochrome c oxidase assembly protein.
   
 
 0.938
APZ42_028560
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 
 0.931
APZ42_014891
Chloride channel CLIC 1-like protein.
  
 
 0.923
APZ42_017257
Cytochrome c oxidase subunit 6A, mitochondrial.
     
 0.920
APZ42_030989
Cytochrome C oxidase subunit.
     
 0.919
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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