STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_020453HMG box domain-containing protein. (424 aa)    
Predicted Functional Partners:
APZ42_021349
Paired amphipathic helix protein Sin3b.
    
 
 0.870
APZ42_016916
Mitogen-activated protein kinase.
     
 0.618
APZ42_029154
Translation initiation factor IF-2.
      
 0.562
EOG090X0CTI
Glucose-induced degradation protein 8.
    
 
 0.518
APZ42_022697
RING finger protein 11.
      
 0.489
APZ42_026735
Protein RMD5 B.
    
 
 0.484
APZ42_030790
Interleukin-1 receptor-associated kinase 4.
   
  0.452
APZ42_031044
Interleukin-1 receptor-associated kinase 4.
   
  0.452
APZ42_016993
Tyrosine-protein kinase.
   
  0.450
APZ42_003369
ANK_REP_REGION domain-containing protein.
    
  0.434
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.