APZ42_019860 protein (Daphnia magna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

APZ42_019860

Toll-interacting protein. (325 aa)

Predicted Functional Partners:

APZ42_018669

0.899

APZ42_022696

0.894

APZ42_030790

0.879

APZ42_031044

0.834

APZ42_033871

0.709

APZ42_023581

0.656

APZ42_029285

0.623

APZ42_019809

0.599

APZ42_024246

0.584

APZ42_028523

0.577

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_018669	APZ42_019809	A0A0P5NLR4	A0A164XRA7	Putative ADP-ribosylation factor-binding protein GGA1.	Protein kinase domain-containing protein.	0.523
APZ42_018669	APZ42_019860	A0A0P5NLR4	A0A164XS69	Putative ADP-ribosylation factor-binding protein GGA1.	Toll-interacting protein.	0.899
APZ42_018669	APZ42_033871	A0A0P5NLR4	A0A164KNT3	Putative ADP-ribosylation factor-binding protein GGA1.	Leucine-rich repeat kinase.	0.608
APZ42_019809	APZ42_018669	A0A164XRA7	A0A0P5NLR4	Protein kinase domain-containing protein.	Putative ADP-ribosylation factor-binding protein GGA1.	0.523
APZ42_019809	APZ42_019860	A0A164XRA7	A0A164XS69	Protein kinase domain-containing protein.	Toll-interacting protein.	0.599
APZ42_019809	APZ42_033871	A0A164XRA7	A0A164KNT3	Protein kinase domain-containing protein.	Leucine-rich repeat kinase.	0.600
APZ42_019860	APZ42_018669	A0A164XS69	A0A0P5NLR4	Toll-interacting protein.	Putative ADP-ribosylation factor-binding protein GGA1.	0.899
APZ42_019860	APZ42_019809	A0A164XS69	A0A164XRA7	Toll-interacting protein.	Protein kinase domain-containing protein.	0.599
APZ42_019860	APZ42_022696	A0A164XS69	A0A0P6A3R2	Toll-interacting protein.	Myeloid differentiation primary response protein MyD88.	0.894
APZ42_019860	APZ42_023581	A0A164XS69	A0A0P5ZCT5	Toll-interacting protein.	FAS-associated factor 1.	0.656
APZ42_019860	APZ42_024246	A0A164XS69	A0A0P4YZE6	Toll-interacting protein.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.584
APZ42_019860	APZ42_028523	A0A164XS69	A0A0P5E5D1	Toll-interacting protein.	Bis(5'-adenosyl)-triphosphatase.	0.577
APZ42_019860	APZ42_029285	A0A164XS69	A0A0P6CK87	Toll-interacting protein.	Toll receptor; Belongs to the Toll-like receptor family.	0.623
APZ42_019860	APZ42_030790	A0A164XS69	A0A0P5T3L4	Toll-interacting protein.	Interleukin-1 receptor-associated kinase 4.	0.879
APZ42_019860	APZ42_031044	A0A164XS69	A0A164N707	Toll-interacting protein.	Interleukin-1 receptor-associated kinase 4.	0.834
APZ42_019860	APZ42_033871	A0A164XS69	A0A164KNT3	Toll-interacting protein.	Leucine-rich repeat kinase.	0.709
APZ42_022696	APZ42_019860	A0A0P6A3R2	A0A164XS69	Myeloid differentiation primary response protein MyD88.	Toll-interacting protein.	0.894
APZ42_022696	APZ42_029285	A0A0P6A3R2	A0A0P6CK87	Myeloid differentiation primary response protein MyD88.	Toll receptor; Belongs to the Toll-like receptor family.	0.836
APZ42_022696	APZ42_030790	A0A0P6A3R2	A0A0P5T3L4	Myeloid differentiation primary response protein MyD88.	Interleukin-1 receptor-associated kinase 4.	0.986
APZ42_022696	APZ42_031044	A0A0P6A3R2	A0A164N707	Myeloid differentiation primary response protein MyD88.	Interleukin-1 receptor-associated kinase 4.	0.988