STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_018888Uncharacterized protein. (474 aa)    
Predicted Functional Partners:
APZ42_021410
NADH dehydrogenase (Ubiquinone) complex I, assembly factor.
  
 
 0.965
APZ42_011800
Dehydrogenase/reductase SDR family member.
  
 
 0.839
APZ42_019175
Short-chain dehydrogenase/reductase family 16C member 6; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.817
APZ42_017017
Putative 3-keto-steroid reductase.
    
 0.771
APZ42_032143
Epidermal retinol dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.770
APZ42_032135
Short-chain dehydrogenase/reductase family 16C; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.770
APZ42_019077
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.766
APZ42_001585
Retinol dehydrogenase 12.
    
 0.762
APZ42_027262
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.762
APZ42_020349
Cytochrome b5-related protein; Belongs to the cytochrome b5 family.
    
 0.747
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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