STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_018910Voltage-dependent anion-selective channel. (281 aa)    
Predicted Functional Partners:
APZ42_034168
Mitochondrial import receptor subunit TOM20.
   
 0.945
APZ42_017079
Mitochondrial import receptor subunit TOM40B.
    
 0.937
EOG090X01A3
Transmembrane GTPase Marf; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.929
APZ42_023975
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.
    
 0.922
APZ42_013204
Cytochrome c-2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.915
APZ42_016539
ADP/ATP translocase 3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.911
APZ42_012465
Mitochondrial import receptor subunit TOM70.
    
 0.901
APZ42_013181
L-isoaspartate(D-aspartate) O-methyltransferase.
   
 0.896
APZ42_017804
COP9 signalosome complex subunit 4.
 
 
  
 0.885
APZ42_016041
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.881
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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