STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_018354Kin of IRRE protein 3. (774 aa)    
Predicted Functional Partners:
APZ42_027628
Death-associated protein kinase 2.
    
 0.880
APZ42_027666
Putative Stretchin-Mlck.
    
 0.880
APZ42_033871
Leucine-rich repeat kinase.
    
 0.852
APZ42_022521
Guanine nucleotide-binding protein G(F) subunit alpha.
    
  0.819
APZ42_019376
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.783
APZ42_014481
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.783
APZ42_022107
Putative SH3 domain-containing RING finger protein 3.
    
  0.750
APZ42_031573
Putative E3 ubiquitin-protein ligase RNF182.
    
  0.749
APZ42_020865
Tyrosine phosphatase 69D protein.
  
 
 0.721
EOG090X04KW
Putative MKL/myocardin protein 1.
    
  0.719
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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