STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_018428VAC14 protein. (676 aa)    
Predicted Functional Partners:
APZ42_027162
1-phosphatidylinositol 3-phosphate 5-kinase.
    
 0.992
APZ42_017967
Polyphosphoinositide phosphatase.
    
 0.992
APZ42_023767
Deleted in autism protein 1.
    
 0.973
APZ42_030960
RAD54, DNA repair and recombination protein.
 
  
   0.906
APZ42_014338
WD repeat domain phosphoinositide-interacting protein 2.
    
 
 0.815
APZ42_024112
DNA repair and recombination protein RAD54B.
 
  
   0.774
APZ42_019806
Tyrosine--tRNA ligase.
      
 0.577
APZ42_014490
Putative Serine/threonine-protein kinase.
    
 
 0.576
APZ42_032690
O-acyltransferase.
      
 0.572
APZ42_026732
Ubiquitin carboxyl-terminal hydrolase.
      
 0.570
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.