STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_01803260S ribosomal L3-like protein; Belongs to the universal ribosomal protein uL3 family. (410 aa)    
Predicted Functional Partners:
APZ42_027865
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.997
EOG090X09YS
60S ribosomal protein L5.
  
 0.992
APZ42_028276
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.991
APZ42_015976
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.991
APZ42_017911
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.991
APZ42_030647
60S ribosomal protein L32.
  
 0.991
APZ42_014695
60S ribosomal protein L7a.
  
 0.991
APZ42_011455
60S ribosomal protein L10.
  
 0.991
APZ42_011665
60S ribosomal protein L7.
  
 0.991
APZ42_030109
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.990
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.