STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_017406HemK methyltransferase family member 2. (218 aa)    
Predicted Functional Partners:
EOG090X0LTV
Multifunctional methyltransferase subunit TRM112-like protein.
    
 0.999
APZ42_016780
Peptide chain release factor 1.
  
 
 0.991
APZ42_013553
Eukaryotic peptide chain release factor subunit 1.
    
 0.881
APZ42_021627
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.876
APZ42_026039
Oxygen-dependent coproporphyrinogen-III oxidase.
   
 
 0.874
APZ42_018609
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
    
 0.846
APZ42_021169
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.
    
 0.739
APZ42_015422
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.727
APZ42_013661
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.727
EOG090X0BEK
ATP synthase subunit gamma.
  
   0.719
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.