STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOG090X0HJHTrafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (142 aa)    
Predicted Functional Partners:
APZ42_034562
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
0.999
APZ42_023487
Trafficking protein particle complex subunit 10.
    
 0.999
APZ42_028181
Trafficking protein particle complex subunit 2.
   
 0.999
APZ42_012670
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.999
APZ42_012391
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.999
APZ42_028573
Trafficking protein particle complex subunit 11.
    
 0.999
APZ42_026193
Trafficking protein particle complex subunit 9.
    
 0.999
APZ42_024010
Trafficking protein particle complex subunit 8.
    
 0.999
APZ42_021416
Trafficking protein particle complex subunit 6B.
   
 0.999
APZ42_020318
Putative Trafficking protein particle complex subunit 12.
    
 0.996
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.