STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_016953Putative Nucleoporin NDC1. (311 aa)    
Predicted Functional Partners:
APZ42_015077
Nuclear pore protein.
   
 0.996
APZ42_023435
Nuclear pore membrane glycoprotein 210.
    
 0.995
APZ42_031762
E3 SUMO-protein ligase RanBP2.
    
 0.995
APZ42_015305
Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.
   
 0.994
APZ42_011135
Aladin.
   
 0.993
APZ42_018104
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
 0.989
APZ42_027333
Nuclear pore complex protein Nup205.
   
 0.985
APZ42_023834
Nuclear pore complex protein Nup50.
   
 
 0.977
APZ42_023172
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.971
APZ42_021847
Nuclear pore complex protein Nup54.
   
 0.971
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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