STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_016641Putative histone H3.3. (150 aa)    
Predicted Functional Partners:
APZ42_008919
JmjC domain-containing protein.
   
 0.925
APZ42_012143
JmjC domain-containing Histone demethylation protein 1.
    
 0.923
APZ42_033871
Leucine-rich repeat kinase.
    
 0.916
APZ42_019907
PHD finger protein 20 protein.
   
 0.864
APZ42_029135
Histone H2A; Belongs to the histone H2A family.
   
 0.863
APZ42_017650
Histone-binding protein RBBP4.
   
 0.847
EOG090X06NC
Histone acetyltransferase type B catalytic subunit.
    
 0.846
APZ42_017853
Putative Histone-lysine N-methyltransferase SETD1.
    
 0.845
EOG090X04Y3
Retinoblastoma-binding protein 5.
    
 0.837
APZ42_020740
Histone acetyltransferase KAT2A.
    
 0.836
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.