STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_016505Transmembrane and TPR repeat-containing-like protein. (611 aa)    
Predicted Functional Partners:
APZ42_032689
Integrator 1.
    
 0.873
APZ42_030793
Protein asunder.
    
 0.872
APZ42_012127
Integrator complex subunit 5.
    
 0.848
EOG090X0205
Integrator complex subunit 3.
    
 0.843
APZ42_028146
Integrator complex subunit.
    
 0.817
APZ42_033871
Leucine-rich repeat kinase.
   
 0.781
APZ42_015102
Glutamate receptor Delta-2 subunit.
    
 0.776
APZ42_024748
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA protein.
    
 0.772
APZ42_027225
Bardet-Biedl Syndrome 7 protein.
    
 0.761
APZ42_022808
Tetratricopeptide repeat protein 8.
    
  0.758
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.