Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEW31406.1 | SEW31429.1 | SAMN04487945_3024 | SAMN04487945_3026 | Xanthine/uracil permease. | Dihydroorotase. | 0.916 |
SEW31406.1 | carA | SAMN04487945_3024 | SAMN04487945_2582 | Xanthine/uracil permease. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.965 |
SEW31406.1 | carB | SAMN04487945_3024 | SAMN04487945_2578 | Xanthine/uracil permease. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.949 |
SEW31406.1 | pyrB | SAMN04487945_3024 | SAMN04487945_0122 | Xanthine/uracil permease. | Aspartate carbamoyltransferase. | 0.999 |
SEW31406.1 | pyrC | SAMN04487945_3024 | SAMN04487945_1681 | Xanthine/uracil permease. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.857 |
SEW31406.1 | pyrD | SAMN04487945_3024 | SAMN04487945_1723 | Xanthine/uracil permease. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.847 |
SEW31406.1 | pyrE | SAMN04487945_3024 | SAMN04487945_2176 | Xanthine/uracil permease. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.949 |
SEW31406.1 | pyrF | SAMN04487945_3024 | SAMN04487945_2414 | Xanthine/uracil permease. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.954 |
SEW31429.1 | SEW31406.1 | SAMN04487945_3026 | SAMN04487945_3024 | Dihydroorotase. | Xanthine/uracil permease. | 0.916 |
SEW31429.1 | carA | SAMN04487945_3026 | SAMN04487945_2582 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.897 |
SEW31429.1 | carB | SAMN04487945_3026 | SAMN04487945_2578 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.906 |
SEW31429.1 | pyrB | SAMN04487945_3026 | SAMN04487945_0122 | Dihydroorotase. | Aspartate carbamoyltransferase. | 0.995 |
SEW31429.1 | pyrD | SAMN04487945_3026 | SAMN04487945_1723 | Dihydroorotase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.959 |
SEW31429.1 | pyrE | SAMN04487945_3026 | SAMN04487945_2176 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.925 |
SEW31429.1 | pyrF | SAMN04487945_3026 | SAMN04487945_2414 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.882 |
SEW31429.1 | pyrI | SAMN04487945_3026 | SAMN04487945_0121 | Dihydroorotase. | Aspartate carbamoyltransferase regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase. | 0.726 |
carA | SEW31406.1 | SAMN04487945_2582 | SAMN04487945_3024 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Xanthine/uracil permease. | 0.965 |
carA | SEW31429.1 | SAMN04487945_2582 | SAMN04487945_3026 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotase. | 0.897 |
carA | carB | SAMN04487945_2582 | SAMN04487945_2578 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.999 |
carA | purA | SAMN04487945_2582 | SAMN04487945_0309 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.479 |
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