Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEV88571.1 | mat | SAMN04487945_0128 | SAMN04487945_0129 | Adenylate cyclase, class 2. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP; Belongs to the AdoMet synthase 2 family. | 0.869 |
| SEV88571.1 | thiI | SAMN04487945_0128 | SAMN04487945_0130 | Adenylate cyclase, class 2. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.528 |
| SEV88618.1 | mat | SAMN04487945_0131 | SAMN04487945_0129 | Hypothetical protein. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP; Belongs to the AdoMet synthase 2 family. | 0.598 |
| SEV88618.1 | thiI | SAMN04487945_0131 | SAMN04487945_0130 | Hypothetical protein. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.962 |
| SEW03224.1 | SEW08257.1 | SAMN04487945_1037 | SAMN04487945_1338 | NOL1/NOP2/sun family putative RNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | TIGR00269 family protein. | 0.426 |
| SEW03224.1 | SEW26661.1 | SAMN04487945_1037 | SAMN04487945_2628 | NOL1/NOP2/sun family putative RNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | MiaB-like tRNA modifying enzyme. | 0.540 |
| SEW03224.1 | thiI | SAMN04487945_1037 | SAMN04487945_0130 | NOL1/NOP2/sun family putative RNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.827 |
| SEW08257.1 | SEW03224.1 | SAMN04487945_1338 | SAMN04487945_1037 | TIGR00269 family protein. | NOL1/NOP2/sun family putative RNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.426 |
| SEW08257.1 | SEW11032.1 | SAMN04487945_1338 | SAMN04487945_1515 | TIGR00269 family protein. | Adenylyltransferase and sulfurtransferase. | 0.824 |
| SEW08257.1 | SEW17964.1 | SAMN04487945_1338 | SAMN04487945_1959 | TIGR00269 family protein. | Sulfur carrier protein. | 0.877 |
| SEW08257.1 | SEW26661.1 | SAMN04487945_1338 | SAMN04487945_2628 | TIGR00269 family protein. | MiaB-like tRNA modifying enzyme. | 0.503 |
| SEW08257.1 | thiI | SAMN04487945_1338 | SAMN04487945_0130 | TIGR00269 family protein. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.539 |
| SEW11032.1 | SEW08257.1 | SAMN04487945_1515 | SAMN04487945_1338 | Adenylyltransferase and sulfurtransferase. | TIGR00269 family protein. | 0.824 |
| SEW11032.1 | SEW16684.1 | SAMN04487945_1515 | SAMN04487945_1872 | Adenylyltransferase and sulfurtransferase. | KEOPS complex subunit Cgi121. | 0.456 |
| SEW11032.1 | SEW17964.1 | SAMN04487945_1515 | SAMN04487945_1959 | Adenylyltransferase and sulfurtransferase. | Sulfur carrier protein. | 0.983 |
| SEW11032.1 | thiI | SAMN04487945_1515 | SAMN04487945_0130 | Adenylyltransferase and sulfurtransferase. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.810 |
| SEW16684.1 | SEW11032.1 | SAMN04487945_1872 | SAMN04487945_1515 | KEOPS complex subunit Cgi121. | Adenylyltransferase and sulfurtransferase. | 0.456 |
| SEW16684.1 | thiI | SAMN04487945_1872 | SAMN04487945_0130 | KEOPS complex subunit Cgi121. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.624 |
| SEW17964.1 | SEW08257.1 | SAMN04487945_1959 | SAMN04487945_1338 | Sulfur carrier protein. | TIGR00269 family protein. | 0.877 |
| SEW17964.1 | SEW11032.1 | SAMN04487945_1959 | SAMN04487945_1515 | Sulfur carrier protein. | Adenylyltransferase and sulfurtransferase. | 0.983 |
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