STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV94071.1Carbon-nitrogen hydrolase. (267 aa)    
Predicted Functional Partners:
SEV98682.1
Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.860
SEW00408.1
Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.860
SEW00375.1
Aspartate aminotransferase.
  
 
 0.825
SEW03148.1
Aspartate aminotransferase.
  
 
 0.825
SEW05689.1
Aspartate/methionine/tyrosine aminotransferase.
  
 
 0.825
SEV94088.1
SH3 domain-containing protein.
  
  
 0.729
SEW30198.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.728
SEW25922.1
Pyridine nucleotide-disulphide oxidoreductase.
   
 
 0.666
SEV94056.1
Hypothetical protein.
       0.645
SEW16739.1
Malate dehydrogenase (NAD); Belongs to the LDH/MDH superfamily.
   
 0.628
Your Current Organism:
Halobacterium jilantaiense
NCBI taxonomy Id: 355548
Other names: CGMCC 1.5337, H. jilantaiense, Halobacterium jilantaiense Yang et al. 2006, JCM 13558, strain NG4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.