STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV94326.1Reversibly glycosylated polypeptide. (383 aa)    
Predicted Functional Partners:
SEV94390.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.936
SEV94341.1
iron(III) transport system substrate-binding protein.
       0.863
SEW02017.1
Cytochrome b(C-terminal)/b6/petD.
  
     0.724
SEV94700.1
Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development).
  
     0.703
SEV87346.1
Halocyanin domain-containing protein.
  
     0.683
SEW30221.1
Plastocyanin.
  
     0.668
SEW19116.1
Plastocyanin.
  
     0.647
SEW02488.1
DnaJ domain-containing protein.
  
     0.608
SEW02131.1
Plastocyanin.
  
     0.606
SEW08010.1
Archaellum biogenesis protein FlaJ, TadC family.
  
     0.603
Your Current Organism:
Halobacterium jilantaiense
NCBI taxonomy Id: 355548
Other names: CGMCC 1.5337, H. jilantaiense, Halobacterium jilantaiense Yang et al. 2006, JCM 13558, strain NG4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.