Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV91915.1 | SEV94448.1 | SAMN04487945_0354 | SAMN04487945_0511 | Glucose-1-phosphate thymidylyltransferase. | PAS/PAC sensor signal transduction histidine kinase. | 0.637 |
SEV93323.1 | SEV93544.1 | SAMN04487945_0442 | SAMN04487945_0456 | PAS domain S-box-containing protein. | Two-component system, chemotaxis family, response regulator CheY. | 0.564 |
SEV93323.1 | SEV94434.1 | SAMN04487945_0442 | SAMN04487945_0510 | PAS domain S-box-containing protein. | HalX domain-containing protein. | 0.567 |
SEV93323.1 | SEV94448.1 | SAMN04487945_0442 | SAMN04487945_0511 | PAS domain S-box-containing protein. | PAS/PAC sensor signal transduction histidine kinase. | 0.430 |
SEV93323.1 | SEV97663.1 | SAMN04487945_0442 | SAMN04487945_0692 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.625 |
SEV93544.1 | SEV93323.1 | SAMN04487945_0456 | SAMN04487945_0442 | Two-component system, chemotaxis family, response regulator CheY. | PAS domain S-box-containing protein. | 0.564 |
SEV93544.1 | SEV94434.1 | SAMN04487945_0456 | SAMN04487945_0510 | Two-component system, chemotaxis family, response regulator CheY. | HalX domain-containing protein. | 0.458 |
SEV93544.1 | SEV94448.1 | SAMN04487945_0456 | SAMN04487945_0511 | Two-component system, chemotaxis family, response regulator CheY. | PAS/PAC sensor signal transduction histidine kinase. | 0.581 |
SEV93544.1 | SEV97663.1 | SAMN04487945_0456 | SAMN04487945_0692 | Two-component system, chemotaxis family, response regulator CheY. | Response regulator receiver domain-containing protein. | 0.478 |
SEV94404.1 | SEV94420.1 | SAMN04487945_0508 | SAMN04487945_0509 | Hypothetical protein. | Glycosyl transferase family 2. | 0.594 |
SEV94404.1 | SEV94434.1 | SAMN04487945_0508 | SAMN04487945_0510 | Hypothetical protein. | HalX domain-containing protein. | 0.426 |
SEV94404.1 | SEV94448.1 | SAMN04487945_0508 | SAMN04487945_0511 | Hypothetical protein. | PAS/PAC sensor signal transduction histidine kinase. | 0.426 |
SEV94420.1 | SEV94404.1 | SAMN04487945_0509 | SAMN04487945_0508 | Glycosyl transferase family 2. | Hypothetical protein. | 0.594 |
SEV94420.1 | SEV94434.1 | SAMN04487945_0509 | SAMN04487945_0510 | Glycosyl transferase family 2. | HalX domain-containing protein. | 0.602 |
SEV94420.1 | SEV94448.1 | SAMN04487945_0509 | SAMN04487945_0511 | Glycosyl transferase family 2. | PAS/PAC sensor signal transduction histidine kinase. | 0.644 |
SEV94434.1 | SEV93323.1 | SAMN04487945_0510 | SAMN04487945_0442 | HalX domain-containing protein. | PAS domain S-box-containing protein. | 0.567 |
SEV94434.1 | SEV93544.1 | SAMN04487945_0510 | SAMN04487945_0456 | HalX domain-containing protein. | Two-component system, chemotaxis family, response regulator CheY. | 0.458 |
SEV94434.1 | SEV94404.1 | SAMN04487945_0510 | SAMN04487945_0508 | HalX domain-containing protein. | Hypothetical protein. | 0.426 |
SEV94434.1 | SEV94420.1 | SAMN04487945_0510 | SAMN04487945_0509 | HalX domain-containing protein. | Glycosyl transferase family 2. | 0.602 |
SEV94434.1 | SEV94448.1 | SAMN04487945_0510 | SAMN04487945_0511 | HalX domain-containing protein. | PAS/PAC sensor signal transduction histidine kinase. | 0.875 |
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