STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW08099.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
SEW08066.1
Hypothetical protein.
     
 0.916
SEW08081.1
Hypothetical protein.
       0.912
SEW07995.1
Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase.
       0.890
SEW08010.1
Archaellum biogenesis protein FlaJ, TadC family.
       0.890
SEW08035.1
Flagellin N-terminal-like domain-containing protein.
       0.890
SEW08049.1
Hypothetical protein.
       0.890
SEW07983.1
Protein of unknown function.
       0.519
SEW07910.1
Hypothetical protein.
       0.424
SEW07931.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
       0.424
SEW07947.1
Hypothetical protein.
       0.424
Your Current Organism:
Halobacterium jilantaiense
NCBI taxonomy Id: 355548
Other names: CGMCC 1.5337, H. jilantaiense, Halobacterium jilantaiense Yang et al. 2006, JCM 13558, strain NG4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.