STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW12066.1Hypothetical protein. (314 aa)    
Predicted Functional Partners:
SEW10554.1
Phage integrase family protein; Manually curated.
  
     0.567
SEW00655.1
Site-specific recombinase XerD.
  
     0.499
SEW06770.1
Hypothetical protein.
  
     0.471
SEW15156.1
Transcriptional regulator, ArsR family.
  
     0.471
SEW00741.1
Phage integrase, N-terminal SAM-like domain.
  
     0.466
SEW28707.1
Protein of unknown function, DUF547.
  
     0.465
hflX-2
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.463
SEW18172.1
Signal peptidase, endoplasmic reticulum-type.
  
     0.458
SEW24747.1
RecA-superfamily ATPase, KaiC/GvpD/RAD55 family.
  
     0.457
SEW27221.1
Hypothetical protein.
  
     0.454
Your Current Organism:
Halobacterium jilantaiense
NCBI taxonomy Id: 355548
Other names: CGMCC 1.5337, H. jilantaiense, Halobacterium jilantaiense Yang et al. 2006, JCM 13558, strain NG4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.