STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW13724.1Nucleotide-binding universal stress protein, UspA family. (126 aa)    
Predicted Functional Partners:
SEW13741.1
Acetyltransferase (GNAT) family protein.
 
   
 0.982
SEW13708.1
Hypothetical protein.
       0.692
SEW13757.1
Hypothetical protein.
       0.639
SEV91235.1
Hypothetical protein.
  
     0.602
SEV94649.1
Hypothetical protein.
  
     0.575
SEW06770.1
Hypothetical protein.
  
     0.557
SEW22135.1
Arginine decarboxylase.
  
     0.556
SEW27252.1
CBS domain-containing protein.
  
    0.556
SEW13819.1
Hypothetical protein.
 
     0.554
SEW06670.1
methylated-DNA-[protein]-cysteine S-methyltransferase.
  
    0.548
Your Current Organism:
Halobacterium jilantaiense
NCBI taxonomy Id: 355548
Other names: CGMCC 1.5337, H. jilantaiense, Halobacterium jilantaiense Yang et al. 2006, JCM 13558, strain NG4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.