Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV95407.1 | SEW15390.1 | SAMN04487945_0568 | SAMN04487945_1794 | Arginase; Manually curated; Belongs to the arginase family. | acetylornithine/LysW-gamma-L-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.776 |
SEV95407.1 | SEW15422.1 | SAMN04487945_0568 | SAMN04487945_1796 | Arginase; Manually curated; Belongs to the arginase family. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.934 |
SEV95407.1 | SEW21042.1 | SAMN04487945_0568 | SAMN04487945_2206 | Arginase; Manually curated; Belongs to the arginase family. | L-glutamine synthetase. | 0.419 |
SEV95407.1 | argG | SAMN04487945_0568 | SAMN04487945_1788 | Arginase; Manually curated; Belongs to the arginase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.420 |
SEV95407.1 | argH | SAMN04487945_0568 | SAMN04487945_1789 | Arginase; Manually curated; Belongs to the arginase family. | Argininosuccinate lyase. | 0.869 |
SEV95407.1 | lysA | SAMN04487945_0568 | SAMN04487945_1124 | Arginase; Manually curated; Belongs to the arginase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.497 |
SEV95407.1 | lysK | SAMN04487945_0568 | SAMN04487945_1795 | Arginase; Manually curated; Belongs to the arginase family. | Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. | 0.918 |
SEW15340.1 | SEW15390.1 | SAMN04487945_1791 | SAMN04487945_1794 | [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase. | acetylornithine/LysW-gamma-L-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.898 |
SEW15340.1 | SEW15422.1 | SAMN04487945_1791 | SAMN04487945_1796 | [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.811 |
SEW15340.1 | argG | SAMN04487945_1791 | SAMN04487945_1788 | [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.628 |
SEW15340.1 | argH | SAMN04487945_1791 | SAMN04487945_1789 | [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase. | Argininosuccinate lyase. | 0.522 |
SEW15340.1 | lysK | SAMN04487945_1791 | SAMN04487945_1795 | [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase. | Acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. | 0.964 |
SEW15340.1 | lysY | SAMN04487945_1791 | SAMN04487945_1792 | [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase. | N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.983 |
SEW15340.1 | lysZ | SAMN04487945_1791 | SAMN04487945_1793 | [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase. | N-acetylglutamate kinase; Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis); Belongs to the acetylglutamate kinase family. LysZ subfamily. | 0.996 |
SEW15390.1 | SEV95407.1 | SAMN04487945_1794 | SAMN04487945_0568 | acetylornithine/LysW-gamma-L-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Arginase; Manually curated; Belongs to the arginase family. | 0.776 |
SEW15390.1 | SEW15340.1 | SAMN04487945_1794 | SAMN04487945_1791 | acetylornithine/LysW-gamma-L-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase. | 0.898 |
SEW15390.1 | SEW15422.1 | SAMN04487945_1794 | SAMN04487945_1796 | acetylornithine/LysW-gamma-L-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.981 |
SEW15390.1 | SEW21042.1 | SAMN04487945_1794 | SAMN04487945_2206 | acetylornithine/LysW-gamma-L-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | L-glutamine synthetase. | 0.785 |
SEW15390.1 | argG | SAMN04487945_1794 | SAMN04487945_1788 | acetylornithine/LysW-gamma-L-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.990 |
SEW15390.1 | argH | SAMN04487945_1794 | SAMN04487945_1789 | acetylornithine/LysW-gamma-L-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Argininosuccinate lyase. | 0.991 |
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