STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW17635.1Dipeptidyl aminopeptidase/acylaminoacyl peptidase. (674 aa)    
Predicted Functional Partners:
SEW13439.1
Leucyl aminopeptidase (aminopeptidase T).
   
    0.673
SEW26338.1
Cold-shock DNA-binding protein family.
      
 0.614
SEW17649.1
Pyridine nucleotide-disulphide oxidoreductase.
       0.595
SEW17666.1
Iron complex transport system substrate-binding protein.
       0.594
SEW17677.1
Uncharacterized protein, YigZ family.
       0.497
SEW09339.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
  
     0.482
SEW18172.1
Signal peptidase, endoplasmic reticulum-type.
  
  
 0.452
SEV87497.1
16S rRNA (guanine1207-N2)-methyltransferase.
  
 
   0.412
SEW11868.1
Carboxypeptidase Taq Metallo peptidase. MEROPS family M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
   
    0.402
Your Current Organism:
Halobacterium jilantaiense
NCBI taxonomy Id: 355548
Other names: CGMCC 1.5337, H. jilantaiense, Halobacterium jilantaiense Yang et al. 2006, JCM 13558, strain NG4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.