STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW28555.1Hypothetical protein. (414 aa)    
Predicted Functional Partners:
SEW28565.1
Protein of unknown function.
       0.859
SEW28579.1
Sirohydrochlorin ferrochelatase.
       0.817
SEW28590.1
Hypothetical protein.
       0.817
SEW28601.1
4Fe-4S single cluster domain-containing protein.
       0.817
SEW28611.1
Precorrin-3 methyltransferase.
       0.817
SEW28624.1
Precorrin-3 methyltransferase.
       0.817
SEW28637.1
Uncharacterized membrane protein YckC, RDD family.
       0.516
Your Current Organism:
Halobacterium jilantaiense
NCBI taxonomy Id: 355548
Other names: CGMCC 1.5337, H. jilantaiense, Halobacterium jilantaiense Yang et al. 2006, JCM 13558, strain NG4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.