Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEW01510.1 | SEW29964.1 | SAMN04487945_0921 | SAMN04487945_2881 | N-6 DNA Methylase. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.636 |
SEW01510.1 | SEW34520.1 | SAMN04487945_0921 | SAMN04487945_3033 | N-6 DNA Methylase. | Hypothetical protein. | 0.624 |
SEW03377.1 | SEW34511.1 | SAMN04487945_1046 | SAMN04487945_3032 | Superfamily II DNA or RNA helicase. | SNF2 family N-terminal domain-containing protein; Partial gene; manually curated. | 0.611 |
SEW03377.1 | SEW34520.1 | SAMN04487945_1046 | SAMN04487945_3033 | Superfamily II DNA or RNA helicase. | Hypothetical protein. | 0.414 |
SEW29964.1 | SEW01510.1 | SAMN04487945_2881 | SAMN04487945_0921 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | N-6 DNA Methylase. | 0.636 |
SEW29964.1 | SEW34520.1 | SAMN04487945_2881 | SAMN04487945_3033 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Hypothetical protein. | 0.978 |
SEW34511.1 | SEW03377.1 | SAMN04487945_3032 | SAMN04487945_1046 | SNF2 family N-terminal domain-containing protein; Partial gene; manually curated. | Superfamily II DNA or RNA helicase. | 0.611 |
SEW34511.1 | SEW34520.1 | SAMN04487945_3032 | SAMN04487945_3033 | SNF2 family N-terminal domain-containing protein; Partial gene; manually curated. | Hypothetical protein. | 0.798 |
SEW34511.1 | SEW34528.1 | SAMN04487945_3032 | SAMN04487945_3034 | SNF2 family N-terminal domain-containing protein; Partial gene; manually curated. | Putative inner membrane protein. | 0.535 |
SEW34511.1 | SEW34536.1 | SAMN04487945_3032 | SAMN04487945_3035 | SNF2 family N-terminal domain-containing protein; Partial gene; manually curated. | Hypothetical protein. | 0.535 |
SEW34511.1 | SEW34546.1 | SAMN04487945_3032 | SAMN04487945_3036 | SNF2 family N-terminal domain-containing protein; Partial gene; manually curated. | Protein of unknown function. | 0.535 |
SEW34511.1 | SEW34552.1 | SAMN04487945_3032 | SAMN04487945_3037 | SNF2 family N-terminal domain-containing protein; Partial gene; manually curated. | Hypothetical protein. | 0.535 |
SEW34511.1 | SEW34559.1 | SAMN04487945_3032 | SAMN04487945_3038 | SNF2 family N-terminal domain-containing protein; Partial gene; manually curated. | PglZ domain-containing protein. | 0.561 |
SEW34511.1 | rad25 | SAMN04487945_3032 | SAMN04487945_3030 | SNF2 family N-terminal domain-containing protein; Partial gene; manually curated. | DNA excision repair protein ERCC-3. | 0.608 |
SEW34520.1 | SEW01510.1 | SAMN04487945_3033 | SAMN04487945_0921 | Hypothetical protein. | N-6 DNA Methylase. | 0.624 |
SEW34520.1 | SEW03377.1 | SAMN04487945_3033 | SAMN04487945_1046 | Hypothetical protein. | Superfamily II DNA or RNA helicase. | 0.414 |
SEW34520.1 | SEW29964.1 | SAMN04487945_3033 | SAMN04487945_2881 | Hypothetical protein. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.978 |
SEW34520.1 | SEW34511.1 | SAMN04487945_3033 | SAMN04487945_3032 | Hypothetical protein. | SNF2 family N-terminal domain-containing protein; Partial gene; manually curated. | 0.798 |
SEW34520.1 | SEW34528.1 | SAMN04487945_3033 | SAMN04487945_3034 | Hypothetical protein. | Putative inner membrane protein. | 0.535 |
SEW34520.1 | SEW34536.1 | SAMN04487945_3033 | SAMN04487945_3035 | Hypothetical protein. | Hypothetical protein. | 0.886 |
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