Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CTI12_AA572400Uncharacterized protein. (454 aa)    
Predicted Functional Partners:
CTI12_AA302790
Protein serine/threonine phosphatase.
    
  0.596
CTI12_AA362390
Protein serine/threonine phosphatase.
    
  0.596
CTI12_AA302950
Purine permease.
  
 
   0.449
CTI12_AA181050
Ankyrin repeat-containing protein.
    
  0.449
CTI12_AA138620
Ankyrin repeat-containing protein.
    
  0.449
CTI12_AA389240
Uncharacterized protein.
  
 
   0.447
CTI12_AA327220
Purine permease.
  
 
   0.447
CTI12_AA526500
Ankyrin repeat-containing protein.
  
     0.443
CTI12_AA158660
VQ motif-containing protein.
  
     0.443
CTI12_AA229690
Translocon-associated protein subunit beta.
  
     0.441
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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